| Protein ZmMTERF5 | |
|---|---|
|
ZmMTERF5 is a protein in the mTERF family.
|
|
| Information | |
| TF Name: | ZmMTERF5 |
| Species: | Maize |
| TF Family: | mTERF |
| Gene Name(Synonym): | MTERF5 |
| Uniprot ID: | B6SI40 |
Protein ZmMTERF5
ZmMTERF5 is a protein in the mTERF family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF02536 | |
| Zm00001eb062820_T002 |  |
| Zm00001eb062820_T001 | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d034669 | DAPseq |  |
sequence | fimo | position |
| Zm00001d034669 | DAPseq |  |
sequence | fimo | position |
| Zm00001d034669 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d034669 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmMTERF5 is the regulator
Interactions where ZmMTERF5 is the target
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Zm00001eb062820_T002 from maize genome v5
Amino Acid Sequence
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MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF02536 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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GACCTAATCCCCTTCCCTCCCATTG...
GACCTAATCCCCTTCCCTCCCATTGGCAGCCGTCGCCATGCTGCGCGTCCGAAATCGGCTCCTCCCTCTGCTCGGCGCCGCCTCCCCGCTTCCCTCCCCCATCCACATCCACCTCCGCGTGTGCCGCCTCCTCTCCACCTCCACCTCTACGGCCACCGTCCCCGCACCCTTCTCCCTTGAGAACTACCTCGTCGCCGCCTGCGGCTTCGCACCCGCCCAAGCTCGCTTGGTGTCCAAGAAGGCGTTCAACGAGTTGTCCAGGGAATCCAAGAGATCATCGGAGGAGCACTCCTGCAGACGCCTCATCTCCGCCTCCAACCCAGATGCCATCCTCGCGCTGCTCTCCGGCGCCGGCCTCTCCCGCGCCGACATCGCCGCCGTCGTCTTTGCGGACCCGCTGATCCTCCGCGCTTCCGTGAGTAAAATCGCACCCCGCCTTGTCGCTCTCCGCGACCGCGTCGGCCTGTCTACTCCCCAGATCGCTCGCTTCCTCCTGGTCGGCTCACGCGCTCTCCGCCGGTGCGACGTCGTTCCCAAGGTTGAGTTCTTCTTGTCCTTCTTGGGCTCCTTTGATCGGGTACTGGCGGTCGCAAAGGCAAACTTGGGCATCTTCAACGCGAACCTTGAGAAGGTAATAAAGCCCAACATAGACTTGTTTCGTCAACGCGGCGTTCGAAACGTCCCTAAGATCTGTCTCCACCGCCCACGGACGCTTTCCTTTAACCTCGAACGCGTGAAGGAATTTTTGCTGCGGGCAGAAGAACTTGGGGTGCCTGCCGCGTCGCCCTTGTTCATGCAAGCAGTGGGAGTCGTCACCAGTTTTCCCCCTGAGAAGGTTGCTGCCAAACTTGACTTCTTTAAGAGGACTCTTGGTTGTTCTGAGTCTGAGGTTTCGAATGCAGTGTCCAAGATGCCACAAATACTAGCATTGTCTGAGGCGACTCTTCTTCGCAAGATCGAGTTCCTGGTCAATGAGGGGGCGATAGAGCCACAGTATATTATGCAAAGGCCTATCCTGCTCGCATTCAGCTTGGAGAAGCGGCTAGTGCCCCGGTATCGTGTCATCAAAGTGCTGCAGGGAAAGGGATTGCTGAATAGCAACATGAGCCTTTCCTCATTAGCTTCTCTTGCAGAAGAAACCTTCAAGTCCAAGTTCGTCGACTGCCACAAGGACTGTGTTCCTGGCCTTGCAGATGCTTATGCTGCAGCTTGTGCTAGTATTGTGCCCTCGACAGTGTAAGTTAAGCCGTTTCAAAAACAAAAACAGTGTAAGTTAAGCTTCTCATTTTGTGTTTTAGGTGGATGCTCATTGGCTGCTGTCCACTCTGCAATTTTGATTTCTGAAGTATATAACCACTCATGATCACTGATTGGTCATATCCAAGGTTTAAGTTATGGACTTGTGGTTATTGATGAAAGGAGCTGTGTTTGGCTTGTTCTGGATGCTTAATGCACGTTTTGTTGGTTTCATCTTCTGCCTAGCACATGGCCTAAGATTATCCTTAACTTCGTTGTCTTCCGTGGATCAGTCTTTGATGTAGAGCAGTATCTGTAAGGGAATGAGATGCTGACAGAATCTAAGTCTTAAAACTTTTTATTACTACCATTTTGTTTACTTTTTTTTTGTTTTAAGTAGGAATTATCTTGGAACTATTTCTACTTTTGTGCCTTTGCATGATAGTAGCAGGCATAGTGCTATTTATAAAGTTTAGCAACTGATATGGCAGGGTTACGGATCATGAGCTGATGTAACCACTGATGCCCTCTGTTCTGAGCTGTCGCTGGAATGATGTAACCACCGATGCCCTCTGTTCCGAGCTGCCGCTGAAATTCTAGATCTCTAAACTTGTGTG
GRMZM2G159766_T01 from maize genome v3
Amino Acid Sequence
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MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
Nucleotide Sequence
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CAAACACGCCCTTGGAGACCTTCCC...
CAAACACGCCCTTGGAGACCTTCCCCTGCCGCGGCGAGGACACCGCTTGCTTTCACGGCCGACGACCTAATCCCCTTCCCTCCCATTGGCAGCCGTCGCCATGCTGCGCGTCCGAAATCGGCTCCTCCCTCTGCTCGGCGCCGCCTCCCCGCTTCCCTCCCCCATCCACATCCACCTCCGCGTGTGCCGCCTCCTCTCCACCTCCACCTCTACGGCCACCGTCCCCGCACCCTTCTCCCTTGAGAACTACCTCGTCGCCGCCTGCGGCTTCGCACCCGCCCAAGCTCGCTTGGTGTCCAAGAAGGCGTTCAACGAGTTGTCCAGGGAATCCAAGAGATCATCGGAGGAGCACTCCTGCAGACGCCTCATCTCCGCCTCCAACCCAGATGCCATCCTCGCGCTGCTCTCCGGCGCCGGCCTCTCCCGCGCCGACATCGCCGCCGTCGTCTTTGCGGACCCGCTGATCCTCCGCGCTTCCGTGAGTAAAATCGCACCCCGCCTTGTCGCTCTCCGCGACCGCGTCGGCCTGTCTACTCCCCAGATCGCTCGCTTCCTCCTGGTCGGCTCACGCGCTCTCCGCCGGTGCGACGTCGTTCCCAAGGTTGAGTTCTTCTTGTCCTTCTTGGGCTCCTTTGATCGGGTACTGGCGGTCGCAAAGGCAAACTTGGGCATCTTCAACGCGAACCTTGAGAAGGTAATAAAGCCCAACATAGACTTGTTTCGTCAACGCGGCGTTCGAAACGTCCCTAAGATCTGTCTCCACCGCCCACGGACGCTTTCCTTTAACCTCGAACGCGTGAAGGAATTTTTGCTGCGGGCAGAAGAACTTGGGGTGCCTGCCGCGTCGCCCTTGTTCATGCAAGCAGTGGGAGTCGTCACCAGTTTTCCCCCTGAGAAGGTTGCTGCCAAACTTGACTTCTTTAAGAGGACTCTTGGTTGTTCTGAGTCTGAGGTTTCGAATGCAGTGTCCAAGATGCCACAAATACTAGCATTGTCTGAGGCGACTCTTCTTCGCAAGATCGAGTTCCTGGTCAATGAGGGGGCGATAGAGCCACAGTATATTATGCAAAGGCCTATCCTGCTCGCATTCAGCTTGGAGAAGCGGCTAGTGCCCCGGTATCGTGTCATCAAAGTGCTGCAGGGAAAGGGATTGCTGAATAGCAACATGAGCCTTTCCTCATTAGCTTCTCTTGCAGAAGAAACCTTCAAGTCCAAGTTCGTCGACTGCCACAAGGACTGTGTTCCTGGCCTTGCAGATGCTTATGCTGCAGCTTGTGCTAGTATTGTGCCCTCGACAGTGTAAGTTAAGCCGTTTCAAAAACAAAAACAGTGTAAGTTAAGCTTCTCATTTTGTGTTTTAGGTGGATGCTCATTGGCTGCTGTCCACTCTGCAATTTTGATTTCTGAAGTATATAACCACTCATGATCACTGATTGGTCATATCCAAGGTTTAAGTTATGGACTTGTGGTTATTGATGAAAGGAGCTGTGTTTGGCTTGTTCTGGATGCTTAATGCACGTTTTGTTGGTTTCATCTTCTGCCTAGCACATGGCCTAAGATTATCCTTAACTTCGTTGTCTTCCGTGGATCAGTCTTTGATGTAGAGCAGTATCTGTAAGGGAATGAGATGCTGACAGAATCTAAGTCTTAAAACTTTTTATT
Zm00001d034669_T001 from maize genome v4
Amino Acid Sequence
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MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKVIKPNIDLFRQRGVRNVPKICLHRPRTLSFNLERVKEFLLRA
EELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKRTLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQY
IMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNMSLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
TWPKIILNFVVFRGSVFDVEQYLNYLGTISTFVPLHDSSRHSAIYKV
Nucleotide Sequence
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ATGCTGCGCGTCCGAAATCGGCTCC...
ATGCTGCGCGTCCGAAATCGGCTCCTCCCTCTGCTCGGCGCCGCCTCCCCGCTTCCCTCCCCCATCCACATCCACCTCCGCGTGTGCCGCCTCCTCTCCACCTCCACCTCTACGGCCACCGTCCCCGCACCCTTCTCCCTTGAGAACTACCTCGTCGCCGCCTGCGGCTTCGCACCCGCCCAAGCTCGCTTGGTGTCCAAGAAGGCGTTCAACGAGTTGTCCAGGGAATCCAAGAGATCATCGGAGGAGCACTCCTGCAGACGCCTCATCTCCGCCTCCAACCCAGATGCCATCCTCGCGCTGCTCTCCGGCGCCGGCCTCTCCCGCGCCGACATCGCCGCCGTCGTCTTTGCGGACCCGCTGATCCTCCGCGCTTCCGTGAGTAAAATCGCACCCCGCCTTGTCGCTCTCCGCGACCGCGTCGGCCTGTCTACTCCCCAGATCGCTCGCTTCCTCCTGGTCGGCTCACGCGCTCTCCGCCGGTGCGACGTCGTTCCCAAGGTTGAGTTCTTCTTGTCCTTCTTGGGCTCCTTTGATCGGGTACTGGCGGTCGCAAAGGCAAACTTGGGCATCTTCAACGCGAACCTTGAGAAGGTAATAAAGCCCAACATAGACTTGTTTCGTCAACGCGGCGTTCGAAACGTCCCTAAGATCTGTCTCCACCGCCCACGGACGCTTTCCTTTAACCTCGAACGCGTGAAGGAATTTTTGCTGCGGGCAGAAGAACTTGGGGTGCCTGCCGCGTCGCCCTTGTTCATGCAAGCAGTGGGAGTCGTCACCAGTTTTCCCCCTGAGAAGGTTGCTGCCAAACTTGACTTCTTTAAGAGGACTCTTGGTTGTTCTGAGTCTGAGGTTTCGAATGCAGTGTCCAAGATGCCACAAATACTAGCATTGTCTGAGGCGACTCTTCTTCGCAAGATCGAGTTCCTGGTCAATGAGGGGGCGATAGAGCCACAGTATATTATGCAAAGGCCTATCCTGCTCGCATTCAGCTTGGAGAAGCGGCTAGTGCCCCGGTATCGTGTCATCAAAGTGCTGCAGGGAAAGGGATTGCTGAATAGCAACATGAGCCTTTCCTCATTAGCTTCTCTTGCAGAAGAAACCTTCAAGTCCAAGTTCGTCGACTGCCACAAGGACTGTGTTCCTGGCCTTGCAGATGCTTATGCTGCAGCTTGTGCTAGTATTGTGCCCTCGACAGTCACATGGCCTAAGATTATCCTTAACTTCGTTGTCTTCCGTGGATCAGTCTTTGATGTAGAGCAGTATCTGAATTATCTTGGAACTATTTCTACTTTTGTGCCTTTGCATGATAGTAGCAGGCATAGTGCTATTTATAAAGTTTAG
Zm00001eb062820_T001 from maize genome v5
Amino Acid Sequence
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MLRVRNRLLPLLGAASPLPSPIHIHLRVCRLLSTSTSTATVPAPFSLENYLVAACGFAPAQARLVSKKAFNELSRESKRS
SEEHSCRRLISASNPDAILALLSGAGLSRADIAAVVFADPLILRASVSKIAPRLVALRDRVGLSTPQIARFLLVGSRALR
RCDVVPKVEFFLSFLGSFDRVLAVAKANLGIFNANLEKEFLLRAEELGVPAASPLFMQAVGVVTSFPPEKVAAKLDFFKR
TLGCSESEVSNAVSKMPQILALSEATLLRKIEFLVNEGAIEPQYIMQRPILLAFSLEKRLVPRYRVIKVLQGKGLLNSNM
SLSSLASLAEETFKSKFVDCHKDCVPGLADAYAAACASIVPSTV
Nucleotide Sequence
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GACCTAATCCCCTTCCCTCCCATTG...
GACCTAATCCCCTTCCCTCCCATTGGCAGCCGTCGCCATGCTGCGCGTCCGAAATCGGCTCCTCCCTCTGCTCGGCGCCGCCTCCCCGCTTCCCTCCCCCATCCACATCCACCTCCGCGTGTGCCGCCTCCTCTCCACCTCCACCTCTACGGCCACCGTCCCCGCACCCTTCTCCCTTGAGAACTACCTCGTCGCCGCCTGCGGCTTCGCACCCGCCCAAGCTCGCTTGGTGTCCAAGAAGGCGTTCAACGAGTTGTCCAGGGAATCCAAGAGATCATCGGAGGAGCACTCCTGCAGACGCCTCATCTCCGCCTCCAACCCAGATGCCATCCTCGCGCTGCTCTCCGGCGCCGGCCTCTCCCGCGCCGACATCGCCGCCGTCGTCTTTGCGGACCCGCTGATCCTCCGCGCTTCCGTGAGTAAAATCGCACCCCGCCTTGTCGCTCTCCGCGACCGCGTCGGCCTGTCTACTCCCCAGATCGCTCGCTTCCTCCTGGTCGGCTCACGCGCTCTCCGCCGGTGCGACGTCGTTCCCAAGGTTGAGTTCTTCTTGTCCTTCTTGGGCTCCTTTGATCGGGTACTGGCGGTCGCAAAGGCAAACTTGGGCATCTTCAACGCGAACCTTGAGAAGGAATTTTTGCTGCGGGCAGAAGAACTTGGGGTGCCTGCCGCGTCGCCCTTGTTCATGCAAGCAGTGGGAGTCGTCACCAGTTTTCCCCCTGAGAAGGTTGCTGCCAAACTTGACTTCTTTAAGAGGACTCTTGGTTGTTCTGAGTCTGAGGTTTCGAATGCAGTGTCCAAGATGCCACAAATACTAGCATTGTCTGAGGCGACTCTTCTTCGCAAGATCGAGTTCCTGGTCAATGAGGGGGCGATAGAGCCACAGTATATTATGCAAAGGCCTATCCTGCTCGCATTCAGCTTGGAGAAGCGGCTAGTGCCCCGGTATCGTGTCATCAAAGTGCTGCAGGGAAAGGGATTGCTGAATAGCAACATGAGCCTTTCCTCATTAGCTTCTCTTGCAGAAGAAACCTTCAAGTCCAAGTTCGTCGACTGCCACAAGGACTGTGTTCCTGGCCTTGCAGATGCTTATGCTGCAGCTTGTGCTAGTATTGTGCCCTCGACAGTGTAAGTTAAGCCGTTTCAAAAACAAAAACAGTGTAAGTTAAGCTTCTCATTTTGTGTTTTAGGTGGATGCTCATTGGCTGCTGTCCACTCTGCAATTTTGATTTCTGAAGTATATAACCACTCATGATCACTGATTGGTCATATCCAAGGTTTAAGTTATGGACTTGTGGTTATTGATGAAAGGAGCTGTGTTTGGCTTGTTCTGGATGCTTAATGCACGTTTTGTTGGTTTCATCTTCTGCCTAGCACATGGCCTAAGATTATCCTTAACTTCGTTGTCTTCCGTGGATCAGTCTTTGATGTAGAGCAGTATCTGTAAGGGAATGAGATGCTGACAGAATCTAAGTCTTAAAACTTTTTATTACTACCATTTTGTTTACTTTTTTTTTGTTTTAAGTAGGAATTATCTTGGAACTATTTCTACTTTTGTGCCTTTGCATGATAGTAGCAGGCATAGTGCTATTTATAAAGTTTAGCAACTGATATGGCAGGGTTACGGATCATGAGCTGATGTAACCACTGATGCCCTCTGTTCTGAGCTGTCGCTGGAATGATGTAACCACCGATGCCCTCTGTTCCGAGCTGCCGCTGAAATTCTAGATCTCTAAACTTGTGTG
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